Early onset or syndromic epilepsy
Gene: DPM2EnsemblGeneIds (GRCh38): ENSG00000136908
EnsemblGeneIds (GRCh37): ENSG00000136908
OMIM: 603564, Gene2Phenotype
DPM2 is in 10 panels
5 reviews
Arina Puzriakova (Genomics England Curator)
PMID:33129689: Radenkovic et al. 2021 report the third case of DPM2-CDG in a 23-year-old male with compound het variants in this gene. However, this individual did not display any seizures so maintaining Amber rating on this panel.Created: 20 Apr 2021, 10:17 a.m. | Last Modified: 20 Apr 2021, 10:17 a.m.
Panel Version: 2.323
Rebecca Foulger (Genomics England curator)
As discussed with members of the GMS Neurology Specialist Test Group on the Webex call 22nd November 2019 for Clinical Indication R59 Early onset or syndromic epilepsy: Agreed that there is insufficient evidence to rate this gene Green. Kept rating as Amber.Created: 25 Nov 2019, 8:42 p.m. | Last Modified: 25 Nov 2019, 8:42 p.m.
Panel Version: 1.436
As discussed with members of the GMS Neurology Specialist Test Group on the Webex call Thursday 8th August 2019 for Clinical Indication R59 Early onset or syndromic epilepsy: Agreed that this gene can remain as Amber: DPM2 is Green on the 'Inborn errors of metabolism' panel (467) so will be Green on the Epilepsy Super panel (489).Created: 13 Aug 2019, 4:09 p.m. | Last Modified: 15 Aug 2019, 8:05 a.m.
Panel Version: 1.222
Review and rating collated by Tracy Lester (Oxford Medical Genetics Laboratories Oxford University Hospitals NHS Foundation Trust, 2019_02_06) on behalf of Wessex and West Midlands GLH for GMS Neurology specialist test group, for Clinical Indication R59 'Early onset or syndromic epilepsy'. Review contributors: Alison Callaway and John Taylor. Suggested gene rating: Green.Created: 6 Aug 2019, 8:38 p.m. | Last Modified: 6 Aug 2019, 8:38 p.m.
Panel Version: 1.189
Comment on list classification: Reassessing rating of DPM2 during curation of GMS panel: Evidence remains insufficient for a diagnostic-rating (3 patients from 2 families in the literature: PMIDs 23109149 and 26453362).Created: 4 Jul 2019, 1:15 p.m. | Last Modified: 4 Jul 2019, 1:15 p.m.
Panel Version: 1.120
PMID:26453362: Fiumara et al. 2016 report a patient (patient 2) with Early-onset epileptic encephalopathy (seizure onset in first week). This girl has been previously reported in PMID:23109149 (patient 1 in Barone et al., 2012).Created: 4 Jul 2019, 1:13 p.m. | Last Modified: 4 Jul 2019, 1:13 p.m.
Panel Version: 1.119
PMID:23109149: Barone et al., 2012 describe 3 patients from 2 families with a defect in DPM2. 2 Italian brothers of consagnuineous Sicilian parents were homozygous for an A>G transition (Y23C) in DPM2. An unrelated patient of Sicilian origin, was compound heterozygous for Y23C and a G>C transversion in intron 1 (IVS4-1G-C). Epilepsy was a feature in all 3 patients.Created: 4 Jul 2019, 1:12 p.m. | Last Modified: 4 Jul 2019, 1:12 p.m.
Panel Version: 1.119
Sarah Leigh (Genomics England Curator)
Comment when marking as ready: Based on reviewers' comments.Created: 11 Dec 2018, 1:18 p.m.
Zornitza Stark (Australian Genomics)
Severe epilepsy is a feature of this CDG, but only 3 patients from 2 families reported.Created: 12 Aug 2018, 6:57 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Congenital disorder of glycosylation, type Iu, MIM#615042
Publications
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Amber
- Wessex and West Midlands GLH
- NHS GMS
- Victorian Clinical Genetics Services
- Phenotypes
-
- Congenital disorder of glycosylation, type Iu, OMIM:615042
- OMIM
- 603564
- Clinvar variants
- Variants in DPM2
- Penetrance
- None
- Publications
- Panels with this gene
-
- Congenital disorders of glycosylation
- Likely inborn error of metabolism
- Childhood onset dystonia, chorea or related movement disorder
- Undiagnosed metabolic disorders
- Fetal anomalies
- Arthrogryposis
- Skeletal dysplasia
- Early onset or syndromic epilepsy
- Congenital muscular dystrophy
- Intellectual disability
History Filter Activity
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: DPM2 were changed from Congenital disorder of glycosylation, type Iu 615042; seizures to Congenital disorder of glycosylation, type Iu, OMIM:615042
Entity classified by Genomics England curator
Rebecca Foulger (Genomics England curator)Gene: dpm2 has been classified as Amber List (Moderate Evidence).
Added New Source
Rebecca Foulger (Genomics England curator)Source Wessex and West Midlands GLH was added to DPM2.
Added New Source
Rebecca Foulger (Genomics England curator)Source NHS GMS was added to DPM2.
Set Phenotypes
Rebecca Foulger (Genomics England curator)Phenotypes for gene: DPM2 were changed from Congenital disorder of glycosylation, type Iu 615042 to Congenital disorder of glycosylation, type Iu 615042; seizures
Set publications
Rebecca Foulger (Genomics England curator)Publications for gene: DPM2 were set to 23109149
Entity classified by Genomics England curator
Rebecca Foulger (Genomics England curator)Gene: dpm2 has been classified as Amber List (Moderate Evidence).
Panel promoted to version 1.0
Sarah Leigh (Genomics England Curator)Zornitza Stark: Severe epilepsy is a feature o
Entity classified by Genomics England curator
Sarah Leigh (Genomics England Curator)Gene: dpm2 has been classified as Amber List (Moderate Evidence).
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for gene: DPM2 were changed from to Congenital disorder of glycosylation, type Iu 615042
Set publications
Sarah Leigh (Genomics England Curator)Publications for gene: DPM2 were set to
Set mode of inheritance
Sarah Leigh (Genomics England Curator)Mode of inheritance for gene: DPM2 was changed from to BIALLELIC, autosomal or pseudoautosomal
Added New Source
Sarah Leigh (Genomics England Curator)Expert Review Amber was added to DPM2. Panel: Genetic Epilepsy Syndromes
Added New Source
Sarah Leigh (Genomics England Curator)DPM2 was added to Genetic Epilepsy Syndromes panel. Sources: Victorian Clinical Genetics Services
Created
Sarah Leigh (Genomics England Curator)DPM2 was created by Sarah Leigh