Inherited white matter disorders
Gene: TMEM106BEnsemblGeneIds (GRCh38): ENSG00000106460
EnsemblGeneIds (GRCh37): ENSG00000106460
OMIM: 613413, Gene2Phenotype
TMEM106B is in 7 panels
3 reviews
Arina Puzriakova (Genomics England Curator)
Comment on list classification: Promoting from Red to Green - sufficient unrelated cases (6), hypomyelinating leukodystrophy is the predominant feature of the disease presentation.Created: 12 Nov 2020, 4:50 p.m. | Last Modified: 12 Nov 2020, 4:50 p.m.
Panel Version: 1.83
Associated with relevant phenotype in OMIM, and is a 'probable' gene for 'TMEM106B related hypomyelinating leukodystrophy' in Gene2Phenotype.
Recurrent variant c.754G>A p.(Asp252Asn) identified in 6 unrelated families from different ethnicities. Clinical characteristics include hypomyelinating leukodystrophy (6/6), nystagmus (6/6), hypotonia (5/6), cognitive impairment (5/6), movement disorder (3/6) and seizures (2/6).Created: 12 Nov 2020, 4:49 p.m. | Last Modified: 12 Nov 2020, 4:49 p.m.
Panel Version: 1.82
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Phenotypes
Leukodystrophy, hypomyelinating, 16 OMIM:617964
Publications
Mode of pathogenicity
Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments
Sarah Leigh (Genomics England Curator)
Comment on list classification: This gene is awaiting curator evaluation and rating.Created: 19 Dec 2018, 1:05 p.m.
Zornitza Stark (Australian Genomics)
Recurrent variant identified in 4 unrelated families from different ethnicities. One inherited from mosaic parent. Leukodystrophy is part of the phenotype.Created: 24 Jul 2018, 11:06 a.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Leukodystrophy, hypomyelinating 16, MIM#617964
Publications
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Green
- Phenotypes
-
- Leukodystrophy, hypomyelinating, 16, OMIM:617964
- Leukodystrophy, hypomyelinating, 16, MONDO:0054791
- Tags
- OMIM
- 613413
- Clinvar variants
- Variants in TMEM106B
- Penetrance
- unknown
- Publications
- Mode of Pathogenicity
- Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments
- Panels with this gene
History Filter Activity
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: TMEM106B were changed from Leukodystrophy, hypomyelinating 16, MIM#617964 to Leukodystrophy, hypomyelinating, 16, OMIM:617964; Leukodystrophy, hypomyelinating, 16, MONDO:0054791
Added Tag
Arina Puzriakova (Genomics England Curator)Tag missense tag was added to gene: TMEM106B.
Set publications
Arina Puzriakova (Genomics England Curator)Publications for gene: TMEM106B were set to 29186371, 29444210
Set mode of pathogenicity
Arina Puzriakova (Genomics England Curator)Mode of pathogenicity for gene: TMEM106B was changed from None to Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments
Entity classified by Genomics England curator
Arina Puzriakova (Genomics England Curator)Gene: tmem106b has been classified as Green List (High Evidence).
Entity classified by Genomics England curator
Sarah Leigh (Genomics England Curator)Gene: tmem106b has been classified as Red List (Low Evidence).
Added New Source
Zornitza Stark (Australian Genomics)TMEM106B was added to Inherited white matter disorders panel. Sources: Expert list
Created
Zornitza Stark (Australian Genomics)TMEM106B was created by Zornitza Stark