1. Panels
  2. Likely inborn error of metabolism
  3. GPHN
Genes in panel
Prev Next

Likely inborn error of metabolism

Gene: GPHN

Green List (high evidence)
GPHN (gephyrin)
EnsemblGeneIds (GRCh38): ENSG00000171723
EnsemblGeneIds (GRCh37): ENSG00000171723
OMIM: 603930, Gene2Phenotype
GPHN is in 6 panels

1 review

Ellen McDonagh (Genomics England Curator)

Green List (high evidence)

This gene is linked to Hereditary hyperekplexia and Sulfite oxidase deficiency due to molybdenum cofactor deficiency type C in Orphanet. PMID: 26613940 - homozygous patient with epileptic encephalopathy reported. PMID: 24561070 microdeletions paternally inherited reported in probands with epileptic encephalopathy from 2 families. Perhaps further evidence provided in PMID 25866352 for role of the gene in neurodevelopmental disorders with seizures. PMID 23393157 - 6 additional cases of microdeletions affecting different exons in the gene, in patients with Autism spectrum disorder, seizures or schizophrenia. PMID 23275889 de novo CNV identified in a patient with Autism spectrum disorder. For Molybdenum cofactor deficiency, PMID 22040219 reports a homozygous missense variant in a child with global hypotonia and generalised seizures. PMID 11095995 reports a homozygous deletion in a patient with Molybdenum Cofactor Deficiency. Tagged with the 'treatable' tag as molybdate supplementation according to PMID: 11095995.
Created: 23 Feb 2017, 5:14 p.m.

Mode of inheritance
BOTH monoallelic and biallelic, autosomal or pseudoautosomal

Phenotypes
epileptic encephalopathy; Molybdenum cofactor deficiency C 615501

Publications

Created: 23 Feb 2017, 5:14 p.m.

Panel version: Imported from Undiagnosed metabolic disorders panel version 0.304

Details

Mode of Inheritance
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • London North GLH
  • NHS GMS
  • Expert Review Green
Phenotypes
  • Molybdenum cofactor deficiency C, OMIM:615501
  • Mo cofactor deficiency, complementation group C (Disorders of molybdenum cofactor metabolism)
OMIM
603930
Clinvar variants
Variants in GPHN
Penetrance
None
Publications
Panels with this gene

History Filter Activity

31 Oct 2022, Gel status: 3

Set publications

Arina Puzriakova (Genomics England Curator)

Publications for gene: GPHN were set to 27604308

31 Oct 2022, Gel status: 3

Set Phenotypes

Arina Puzriakova (Genomics England Curator)

Phenotypes for gene: GPHN were changed from Molybdenum cofactor deficiency C 615501; Mo cofactor deficiency, complementation group C (Disorders of molybdenum cofactor metabolism); epileptic encephalopathy to Molybdenum cofactor deficiency C, OMIM:615501; Mo cofactor deficiency, complementation group C (Disorders of molybdenum cofactor metabolism)

13 Feb 2019, Gel status: 4

Added New Source, Added New Source

Ivone Leong (Genomics England Curator)

Source NHS GMS was added to GPHN. Source London North GLH was added to GPHN.

8 Jan 2019, Gel status: 4

Panel promoted to version 1.0

Ellen McDonagh (Genomics England Curator)

Ellen McDonagh: Comment on mode of pathogenici

16 Dec 2018, Gel status: 4

Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes

Ellen McDonagh (Genomics England Curator)

gene: GPHN was added gene: GPHN was added to Inborn errors of metabolism. Sources: Expert Review Green Mode of inheritance for gene: GPHN was set to BOTH monoallelic and biallelic, autosomal or pseudoautosomal Publications for gene: GPHN were set to 27604308 Phenotypes for gene: GPHN were set to Molybdenum cofactor deficiency C 615501; Mo cofactor deficiency, complementation group C (Disorders of molybdenum cofactor metabolism); epileptic encephalopathy