Cytopenias and congenital anaemias
Gene: GCLCEnsemblGeneIds (GRCh38): ENSG00000001084
EnsemblGeneIds (GRCh37): ENSG00000001084
OMIM: 606857, Gene2Phenotype
GCLC is in 6 panels
3 reviews
Louise Daugherty (Genomics England Curator)
Comment on list classification: changed status from Red to Green due to evidence found in the literatureCreated: 13 Mar 2017, 4:26 p.m.
Change status from Red to Green as there are more than three unrelated cases where Hereditary deficiency of gamma-GCS has been reported (associated with low erythrocyte levels of gamma-GCS and GSH leading to hemolytic anemia), see details supplied in publication section
Created: 13 Mar 2017, 4:25 p.m.
Comment on publications: Hereditary deficiency of gamma-GCS has been reported in a small number of patients and is associated with low erythrocyte levels of gamma-GCS and GSH leading to hemolytic anemia, the presence of neurological symptoms has also been reported.
The disorder to date has been detected in nine patients from seven families worldwide, recent examples include:
Mañú Pereira et al 2007 (PMID: 18024385) 1 affected (Moroccan origin) a single C>T transversion at cDNA nucleotide 1241 in the γ-GCS gene, this was the fourth case of GCS deficiency described in which chronic anaemia is associated with both severe neuropathy and mental retardation.
Hamilton et al 2003 (PMID: 12663448) two affected (1 family) reported a novel gamma-GCSH mutation, isolated from the cDNA of 2 related patients diagnosed with gamma-GCS deficiency. Each was found to be homozygous for a C>T missense mutation at nucleotide 379, encoding for a predicted Arg127Cys amino acid change.
Ristoff et al 2000 (PMID:10733484) reported 1 affected (large consanguineous Dutch family)
Beutler et al 1999 (PMID: 10515893) reported 1 affected
Hirono et all 1996 (PMID: 8634459) reported 3 unrelated Japanese patients
Created: 13 Mar 2017, 4:22 p.m.
Comment on phenotypes: included synonym for the disorderCreated: 13 Mar 2017, 2:58 p.m.
Added publications that give evidence of unrelated cases with Hemolytic anemia due to gamma-glutamylcysteine synthetase deficiency, to support the status of the gene changing from Red to Green.Created: 13 Mar 2017, 2:27 p.m.
Publications
Helen Brittain (Genomics England Curator)
Comment when marking as ready: One case identified in the literature - insufficient evidence.Created: 2 Mar 2017, 9:51 a.m.
Only one case reported to date. Insufficient evidence.Created: 2 Mar 2017, 9:49 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Hemolytic anemia due to gamma-glutamylcysteine synthetase deficiency 230450
Publications
BRIDGE consortium (NIHRBR-RD)
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Enzyme Disorder; Hemolytic anemia due to gamma-glutamylcysteine synthetase deficiency
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- Radboud University Medical Center, Nijmegen
- Phenotypes
-
- Enzyme Disorder
- Hemolytic anemia due to gamma-glutamylcysteine synthetase deficiency, 230450
- Glutamate-cysteine ligase deficiency
- OMIM
- 606857
- Clinvar variants
- Variants in GCLC
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
Gene classified by Genomics England curator
Louise Daugherty (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set publications
Louise Daugherty (Genomics England Curator)Publications for GCLC were set to 10515893; 10733484; 12663448; 18024385; 8634459
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for GCLC were set to Enzyme Disorder; Hemolytic anemia due to gamma-glutamylcysteine synthetase deficiency, 230450;Glutamate-cysteine ligase deficiency
Set publications
Louise Daugherty (Genomics England Curator)Publications for GCLC were set to 10515893;10733484; 12663448; 18024385
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for GCLC were set to Enzyme Disorder;Hemolytic anemia due to gamma-glutamylcysteine synthetase deficiency 230450
panel promoted to version 1
Arianna Tucci (Genomics England Curator)Promoted to V1 on 11 March 2017, after internal review and discussion with the clinical team.
Gene classified by Genomics England curator
Helen Brittain (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Set Phenotypes
Helen Brittain (Genomics England Curator)Phenotypes for GCLC were set to Hemolytic anemia due to gamma-glutamylcysteine synthetase deficiency 230450
Set publications
Helen Brittain (Genomics England Curator)Publications for GCLC were set to 10515893
Set Mode of Inheritance
Helen Brittain (Genomics England Curator)Mode of inheritance for GCLC was changed to BIALLELIC, autosomal or pseudoautosomal
Added New Source
Louise Daugherty (Genomics England Curator)GCLC was added to Cytopaenias and congenital anaemiaspanel. Sources: Radboud University Medical Center, Nijmegen
Created
Louise Daugherty (Genomics England Curator)GCLC was created by LouiseD