Retinal disorders
Gene: MT-ATP6EnsemblGeneIds (GRCh38): ENSG00000198899
EnsemblGeneIds (GRCh37): ENSG00000198899
OMIM: 516060, Gene2Phenotype
MT-ATP6 is in 21 panels
4 reviews
Eleanor Williams (Genomics England Curator)
The rating of this gene has been updated to green following NHS Genomic Medicine Service approval.Created: 26 Sep 2024, 3:50 p.m. | Last Modified: 26 Sep 2024, 3:50 p.m.
Panel Version: 6.7
Mode of inheritance
MITOCHONDRIAL
Achchuthan Shanmugasundram (Genomics England Curator)
Comment on list classification: There is ample evidence available for the association of MT-ATP6 gene with retinitis pigmentosa. Hence, this gene can be promoted to green rating in the next GMS review.Created: 17 Apr 2024, 6:31 p.m. | Last Modified: 17 Apr 2024, 6:31 p.m.
Panel Version: 4.86
Pathogenic variants in MT-ATP6 gene cause NARP syndrome. The canonical phenotypic features of this syndrome include proximal muscle weakness, axonal neuropathy, cerebellar ataxia, and retinitis pigmentosa. Noncanonical phenotypic features in NARP include epilepsy, cerebral or cerebellar atrophy, optic atrophy, cognitive impairment, dementia, sleep apnea syndrome, hearing impairment, renal insufficiency, and diabetes. So far, 10 pathogenic variants in MT-ATP6 have been associated with NARP, NARP-like syndrome, or NARP/maternally inherited Leigh overlap syndrome. Most pathogenic MT-ATP6 variants are missense, but a few truncating pathogenic variants have been reported. The most common variant responsible for NARP is the transversion m.8993T>G. Only symptomatic treatment for NARP syndrome is available. In most of the cases, patients die prematurely. Patients with late-onset NARP survive longer.Created: 17 Apr 2024, 6:27 p.m. | Last Modified: 17 Apr 2024, 6:27 p.m.
Panel Version: 4.83
Mode of inheritance
MITOCHONDRIAL
Phenotypes
NARP syndrome, MONDO:0010794
Publications
Andrew Webster (Moorfields Eye Hospital)
The m.8993T>G p.(L156R) variant, usually heteroplasmic, causes retinal dystrophy with or without neuropathy or ataxia. A number of simplex cases have been solved in Genomics England and NIHR. They are often non-syndromic. This should be GREEN.
First published in 1990 by NHNN. PMID 2137962Created: 20 Feb 2024, 2:52 p.m. | Last Modified: 20 Feb 2024, 2:52 p.m.
Panel Version: 4.64
Mode of inheritance
MITOCHONDRIAL
Phenotypes
retinal dystrophy; macular dystrophy; retinitis pigmentosa; neuropathy; ataxia.
Publications
Mode of pathogenicity
Other
Gavin Arno (UCL Institute of Ophthalmology/Moorfields Eye Hospital)
mitochondrialCreated: 30 Aug 2019, 2:12 p.m. | Last Modified: 30 Aug 2019, 2:12 p.m.
Panel Version: 1.159
Details
- Mode of Inheritance
- MITOCHONDRIAL
- Sources
-
- Expert Review Green
- NHS GMS
- Phenotypes
-
- NARP syndrome, MONDO:0010794
- Tags
- OMIM
- 516060
- Clinvar variants
- Variants in MT-ATP6
- Penetrance
- Complete
- Publications
- Panels with this gene
-
- Childhood onset dystonia, chorea or related movement disorder
- Structural basal ganglia disorders
- Hereditary neuropathy
- Adult onset dystonia, chorea or related movement disorder
- Mitochondrial disorders
- Infantile nystagmus
- Optic neuropathy
- Intellectual disability
- Skeletal muscle channelopathy
- Adult onset neurodegenerative disorder
- Retinal disorders
- Likely inborn error of metabolism
- Hereditary ataxia with onset in adulthood
- NARP syndrome or maternally inherited Leigh syndrome
- Ataxia and cerebellar anomalies - narrow panel
- Albinism or congenital nystagmus
- Hereditary ataxia
- Skeletal Muscle Channelopathies
- Paroxysmal central nervous system disorders
- Hereditary neuropathy or pain disorder
- Undiagnosed metabolic disorders
History Filter Activity
Removed Tag, Removed Tag
Sarah Leigh (Genomics England Curator)Tag Q2_24_promote_green was removed from gene: MT-ATP6. Tag Q2_24_NHS_review was removed from gene: MT-ATP6.
Added New Source, Status Update
Sarah Leigh (Genomics England Curator)Source Expert Review Green was added to MT-ATP6. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Added Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag Q2_24_NHS_review tag was added to gene: MT-ATP6.
Added Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag gene-checked tag was added to gene: MT-ATP6.
Entity classified by Genomics England curator
Achchuthan Shanmugasundram (Genomics England Curator)Gene: mt-atp6 has been classified as Amber List (Moderate Evidence).
Set Phenotypes
Achchuthan Shanmugasundram (Genomics England Curator)Phenotypes for gene: MT-ATP6 were changed from Retinitis pigmentosa to NARP syndrome, MONDO:0010794
Set publications
Achchuthan Shanmugasundram (Genomics England Curator)Publications for gene: MT-ATP6 were set to
Added Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag Q2_24_promote_green tag was added to gene: MT-ATP6.
Removed Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag limit of detection for heteroplasmic variants is not validated for WGS testing was removed from gene: MT-ATP6.
Added Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag limit of detection for heteroplasmic variants is not validated for WGS testing tag was added to gene: MT-ATP6.
Added New Source
Ivone Leong (Genomics England Curator)Source NHS GMS was added to MT-ATP6.
Set Mode of Inheritance
Ellen McDonagh (Genomics England Curator)Model of inheritance for gene MT-ATP6 was changed to MITOCHONDRIAL
Added New Source
Ellen McDonagh (Genomics England Curator)MT-ATP6 was added to Posterior segment abnormalitiespanel. Sources: Expert Review Red
Created
Ellen McDonagh (Genomics England Curator)MT-ATP6 was created by ellenmcdonagh