Skeletal dysplasia
Gene: CTSKEnsemblGeneIds (GRCh38): ENSG00000143387
EnsemblGeneIds (GRCh37): ENSG00000143387
OMIM: 601105, Gene2Phenotype
CTSK is in 11 panels
5 reviews
Tracy Lester (Genetics laboratory, Oxford UK)
Osteopetrosis and related disorders SD gp. Several cases reported.; Review on behalf of Tracy LesterCreated: 6 Mar 2019, 11:44 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Pycnodysostosis 265800
Publications
Eleanor Williams (Genomics England Curator)
This gene was part of an initial gene list collated by Tracy Lester, Oxford Medical Genetics Laboratories, Oxford University Hospitals NHS Foundation Trust, February 2019 on behalf of the GMS Musculoskeletal Specialist Group; Gene symbol submitted: CTSK; Initial rating suggestion: GreenCreated: 6 Mar 2019, 11:36 a.m.
Ellen McDonagh (Genomics England Curator)
Comment on publications: new publication PMID: 28328823 - candidate gene sequencing in a Korean adult patient with pycnodysostosis and atypical femur fractur, identified two heterozygos variants within this gene - a missense and a frameshift.Created: 14 Aug 2017, 3:42 p.m.
Sarah Leigh (Genomics England Curator)
Comment when marking as ready: Associated with phenotype in G2P. Numerous variants reported in this phenotype.Created: 11 Jul 2016, 1:08 p.m.
Ana Beleza (Bristol Regional Genetics Service)
Tier 1Created: 17 Jun 2016, 8:02 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Pycnodysostosis 265800
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- NHS GMS
- Expert Review Green
- UKGTN
- Radboud University Medical Center, Nijmegen
- Expert list
- Illumina TruGenome Clinical Sequencing Services
- Emory Genetics Laboratory
- Phenotypes
-
- Pycnodysostosis 265800
- OMIM
- 601105
- Clinvar variants
- Variants in CTSK
- Penetrance
- Complete
- Publications
- Panels with this gene
-
- Lysosomal storage disorder
- Childhood onset dystonia, chorea or related movement disorder
- Likely inborn error of metabolism
- Osteopetrosis
- DDG2P
- Intellectual disability
- Fetal anomalies
- Undiagnosed metabolic disorders
- Skeletal dysplasia
- Rare syndromic craniosynostosis or isolated multisuture synostosis
- Osteogenesis imperfecta
History Filter Activity
Set Phenotypes
Eleanor Williams (Genomics England Curator)Added phenotypes Pycnodysostosis 265800 for gene: CTSK
Added New Source, Status Update
Eleanor Williams (Genomics England Curator)Source NHS GMS was added to CTSK. Rating Changed from Green List (high evidence) to Green List (high evidence)
Set publications
Ellen McDonagh (Genomics England Curator)Publications for CTSK were set to 28328823
panel promoted to version 1
Sarah Leigh (Genomics England Curator)Promoted to version 1 9th August 2016
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for CTSK were set to Pycnodysostosis 265800
Set Mode of Inheritance
Sarah Leigh (Genomics England Curator)Mode of inheritance for CTSK was changed to BIALLELIC, autosomal or pseudoautosomal
Upload gene information
Sarah Leigh (Genomics England Curator)CTSK was added to Unexplained skeletal dysplasiapanel. Sources: Emory Genetics Laboratory,Expert list,Illumina TruGenome Clinical Sequencing Services,Radboud University Medical Center, Nijmegen,UKGTN
Created
Sarah Leigh (Genomics England Curator)CTSK was created by sleigh
Added New Source
Sarah Leigh (Genomics England Curator)CTSK was added to Unexplained skeletal dysplasiapanel. Sources: