Early onset or syndromic epilepsy
Gene: NHLRC1EnsemblGeneIds (GRCh38): ENSG00000187566
EnsemblGeneIds (GRCh37): ENSG00000187566
OMIM: 608072, Gene2Phenotype
NHLRC1 is in 12 panels
8 reviews
Rebecca Foulger (Genomics England curator)
Review and rating collated by Tracy Lester (Oxford Medical Genetics Laboratories Oxford University Hospitals NHS Foundation Trust, 2019_02_06) on behalf of Wessex and West Midlands GLH for GMS Neurology specialist test group, for Clinical Indication R59 'Early onset or syndromic epilepsy'. Review contributors: John Taylor and Helen Lord. Suggested gene rating: Green.Created: 6 Aug 2019, 8:38 p.m. | Last Modified: 6 Aug 2019, 8:38 p.m.
Panel Version: 1.189
Tracy Lester (Genetics laboratory, Oxford UK)
previously called EPM2B. AR progressive myoclonic epilepsy 2B (Lafora) - for info on disease see EPM2A. Chan et al, 2003 - 34 probands with Lafora disease - 17 diff mutations in 26 families incl 8 dels, 1 ins, 7 missense and 1 nonsense. 18 families hom and 8 compound het. Gomez-Abad et al, 2005 - identified 18 mutations incl 12 novel in 23/25 with Lafora disease. P69A was a predominant mutation in 89 unrelated families. Singh et al, 2005 6 diff mutations in 5 of 8 Japenese families with Lafora disease. Singh et sal, 2006 7 diff mutations incl 2 novel mutations in this gene in aff males of 8 families with Lafora disease.Created: 6 Aug 2019, 8:31 p.m. | Last Modified: 6 Aug 2019, 8:31 p.m.
Panel Version: 1.188
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Epilepsy, progressive myoclonic 2B (Lafora), 254780
Publications
Sarah Leigh (Genomics England Curator)
Comment when marking as ready: Associated with phenotype in OMIM and not in Gen2Phen. At least 7 variants identified in unrelated cases.Created: 16 Oct 2018, 3:18 p.m.
Zornitza Stark (Australian Genomics)
Multiple individuals from unrelated families and bi-allelic variants in this gene reported.Created: 17 Aug 2018, 10:58 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Epilepsy, progressive myoclonic 2B (Lafora), MIM#254780
Publications
Variants in this GENE are reported as part of current diagnostic practice
Amy McTague (UCL Institute of Child Health)
Natalie Trump (NHS - Great Ormond Street Hospital)
Manju Kurian (UCL-Institute of Child Health)
Richard Scott (North Thames GMC/UCL)
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Wessex and West Midlands GLH
- NHS GMS
- Expert Review Green
- Emory Genetics Laboratory
- Phenotypes
-
- Epilepsy, progressive myoclonic 2B (Lafora) 254780
- OMIM
- 608072
- Clinvar variants
- Variants in NHLRC1
- Penetrance
- None
- Publications
- Panels with this gene
-
- Undiagnosed metabolic disorders
- Adult onset neurodegenerative disorder
- Childhood onset dystonia, chorea or related movement disorder
- Likely inborn error of metabolism
- Hereditary ataxia with onset in adulthood
- Early onset dementia (encompassing fronto-temporal dementia and prion disease)
- Ataxia and cerebellar anomalies - narrow panel
- Early onset or syndromic epilepsy
- Ketotic hypoglycaemia
- Intellectual disability
- Hereditary ataxia
- Glycogen storage disease
History Filter Activity
Added New Source
Rebecca Foulger (Genomics England curator)Source Wessex and West Midlands GLH was added to NHLRC1.
Added New Source
Rebecca Foulger (Genomics England curator)Source NHS GMS was added to NHLRC1.
Panel promoted to version 1.0
Sarah Leigh (Genomics England Curator)Zornitza Stark: Multiple individuals from unre
Set publications
Sarah Leigh (Genomics England Curator)Publications for gene: NHLRC1 were set to
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for gene: NHLRC1 were changed from to Epilepsy, progressive myoclonic 2B (Lafora) 254780
Entity classified by Genomics England curator
Sarah Leigh (Genomics England Curator)Gene: nhlrc1 has been classified as Green List (High Evidence).
Entity classified by Genomics England curator
Sarah Leigh (Genomics England Curator)Gene: nhlrc1 has been classified as Amber List (Moderate Evidence).
Removed Source, Removed Source, Removed Source, Added New Source, Set mode of inheritance
Sarah Leigh (Genomics England Curator)Source NIHRBR-RD Consortium SPEED_v3.0_20170404 was removed from NHLRC1. Source Expert was removed from NHLRC1. Source Victorian Clinical Genetics Services was removed from NHLRC1. Source Emory Genetics Laboratory was added to NHLRC1. Mode of inheritance for gene NHLRC1 was changed from to BIALLELIC, autosomal or pseudoautosomal
Added New Source
Sarah Leigh (Genomics England Curator)NIHRBR-RD Consortium SPEED_v3.0_20170404 was added to NHLRC1. Panel: Genetic Epilepsy Syndromes
Added New Source
Sarah Leigh (Genomics England Curator)Expert Review Amber was added to NHLRC1. Panel: Genetic Epilepsy Syndromes
Added New Source
Sarah Leigh (Genomics England Curator)Victorian Clinical Genetics Services was added to NHLRC1. Panel: Genetic Epilepsy Syndromes
Added New Source
Sarah Leigh (Genomics England Curator)NHLRC1 was added to Genetic Epilepsy Syndromes panel. Sources: Expert Review Red,Expert
Created
Sarah Leigh (Genomics England Curator)NHLRC1 was created by Sarah Leigh