Genes in panel

Fetal anomalies

Gene: USP14

Green List (high evidence)

USP14 (ubiquitin specific peptidase 14)
EnsemblGeneIds (GRCh38): ENSG00000101557
EnsemblGeneIds (GRCh37): ENSG00000101557
OMIM: 607274, Gene2Phenotype
USP14 is in 2 panels

2 reviews

Achchuthan Shanmugasundram (Genomics England Curator)

Green List (high evidence)

The rating of this gene has been updated to green and the mode of inheritance set to BIALLELIC, autosomal or pseudoautosomal following NHS Genomic Medicine Service approval.
Created: 25 Feb 2025, 11:15 a.m. | Last Modified: 25 Feb 2025, 11:15 a.m.
Panel Version: 5.78
Comment on list classification: There are four unrelated families and functional evidence in support of the association of this gene to this panel. Hence, this gene can be promoted to green rating in the next GMS review.
Created: 26 Jun 2024, 12:32 p.m. | Last Modified: 26 Jun 2024, 12:32 p.m.
Panel Version: 4.23
PMID:35066879 reported the identification of a biallelic 4-bp deletion variant (p.Leu78Glnfs*11) in USP14 gene in three foetuses from two different branches of a consanguineous family, presenting with distal arthrogryposis, underdevelopment of the corpus callosum, and dysmorphic facial features. sp14-deficient mice show a phenotype similar to lethal human MCC phenotypes, with callosal anomalies, muscle wasting, and early lethality, attributed to neuromuscular junction defects due to decreased monomeric ubiquitin pool.

PMID:38469793 reported the identification of biallelic variants in four cases (one foetus, a newborn with a syndromic neurodevelopmental disorder and two siblings with a progressive neurological disease) from three unrelated families. The two siblings had compound heterozygous variants (p.Leu3Pro and p.Arg330Ter), whereas both foetus ( p.Lys300Serfs∗24) and newborn (p.Leu78Glnfs∗11) harboured different homozygous variants.

This gene has been associated with relevant phenotype in Gene2Phenotype (with 'limited' rating on the DD panel), but not yet in OMIM.
Created: 26 Jun 2024, 12:30 p.m. | Last Modified: 26 Jun 2024, 12:30 p.m.
Panel Version: 4.20

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
syndromic disease, MONDO:0002254; distal arthrogryposis, MONDO:0019942

Publications

Zornitza Stark (Australian Genomics)

I don't know

PMID 38469793: biallelic USP14 variants in four individuals from three unrelated families: one fetus, a newborn with a syndromic NDD, and two siblings affected by a progressive neurological disease. Specifically, the two siblings from the latter family carried two compound heterozygous variants c.8T>C p.(Leu3Pro) and c.988C>T p.(Arg330*), while the fetus had a homozygous frameshift c.899_902del p.(Lys300Serfs*24) variant and the newborn patient harbored a homozygous frameshift c.233_236del p.(Leu78Glnfs*11) variant. The fetus and the newborn had extensive brain malformations.
Sources: Literature
Created: 23 Apr 2024, 8:47 p.m.

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Syndromic disease MONDO:0002254, USP14-related

Publications

Details

Mode of Inheritance
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • syndromic disease, MONDO:0002254
  • distal arthrogryposis, MONDO:0019942
Tags
gene-checked
OMIM
607274
Clinvar variants
Variants in USP14
Penetrance
None
Publications
Panels with this gene

History Filter Activity

12 Mar 2025, Gel status: 3

Added Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag gene-checked tag was added to gene: USP14.

25 Feb 2025, Gel status: 3

Removed Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag Q2_24_promote_green was removed from gene: USP14.

25 Feb 2025, Gel status: 3

Added New Source, Added New Source, Status Update

Achchuthan Shanmugasundram (Genomics England Curator)

Source NHS GMS was added to USP14. Source Expert Review Green was added to USP14. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)

26 Jun 2024, Gel status: 2

Entity classified by Genomics England curator

Achchuthan Shanmugasundram (Genomics England Curator)

Gene: usp14 has been classified as Amber List (Moderate Evidence).

26 Jun 2024, Gel status: 0

Set publications

Achchuthan Shanmugasundram (Genomics England Curator)

Publications for gene: USP14 were set to 38469793

26 Jun 2024, Gel status: 0

Set Phenotypes

Achchuthan Shanmugasundram (Genomics England Curator)

Phenotypes for gene: USP14 were changed from Syndromic disease MONDO:0002254, USP14-related to syndromic disease, MONDO:0002254; distal arthrogryposis, MONDO:0019942

26 Jun 2024, Gel status: 0

Added Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag Q2_24_promote_green tag was added to gene: USP14.

23 Apr 2024, Gel status: 0

Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes

Zornitza Stark (Australian Genomics)

gene: USP14 was added gene: USP14 was added to Fetal anomalies. Sources: Literature Mode of inheritance for gene: USP14 was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: USP14 were set to 38469793 Phenotypes for gene: USP14 were set to Syndromic disease MONDO:0002254, USP14-related Review for gene: USP14 was set to AMBER