Primary immunodeficiency or monogenic inflammatory bowel disease
Gene: HMOX1EnsemblGeneIds (GRCh38): ENSG00000100292
EnsemblGeneIds (GRCh37): ENSG00000100292
OMIM: 141250, Gene2Phenotype
HMOX1 is in 2 panels
5 reviews
Sarah Leigh (Genomics England Curator)
The rating of this gene has been updated to green and the mode of inheritance updated to BIALLELIC, autosomal or pseudoautosomal following NHS Genomic Medicine Service approval.Created: 3 May 2024, 8:36 p.m. | Last Modified: 3 May 2024, 8:36 p.m.
Panel Version: 5.3
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Achchuthan Shanmugasundram (Genomics England Curator)
Comment on list classification: As listed in the review of Hannah Knight, there are more than three unrelated cases with biallelic HMOX1 variants reported with asplenia. In addition, recurrent infections, recurrent fever, generalized erythematous rash, hemolysis, inflammation, nephritis, and joint pain were reported in these cases. Hence, this gene can be promoted to green rating in the next GMS review.Created: 13 Oct 2023, 5:21 p.m. | Last Modified: 13 Oct 2023, 5:21 p.m.
Panel Version: 4.45
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Heme oxygenase-1 deficiency, OMIM:614034
Hannah Knight (NIHR BioResource - University of Cambridge)
Multiple reports of asplenia in this condition:
PMID: 33066778 - boy born to nonconsanguineous parents who presented with early onset asplenia, recurrent infections, and associated flares with bone marrow histiocyte activation with worsening interstitial lung disease and joint pain. p.L89Sfs*24 and p.Ala88Profs*51
PMID: 9884342 - case mentioned previously - presented with recurrent fever, generalized erythematous rash, and joint pain, found to have no spleen. Complete deletion of exon2 was found in the maternal allele, and a 2 nucleotide deletion was present within exon3 of the paternal allele.
PMID: 21088618 - mentioned previously - girl with congenital asplenia, who presented with severe hemolysis, inflammation, nephritis. Homozygous for p.R44X
PMID: 22023467 - boy with hemolysis, inflammation, nephritis, and asplenia. Homozygous for p.R44X
PMID: 26526137 - affected boy with small spleen. Homozygous for p.R44XCreated: 9 Oct 2023, 10:56 a.m. | Last Modified: 9 Oct 2023, 10:56 a.m.
Panel Version: 4.35
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Heme oxygenase-1 deficiency
Publications
Louise Daugherty (Genomics England Curator)
Comment on publications: Added publications suggested from external expert reviewCreated: 6 Jul 2018, 12:42 p.m.
OriginaI Metadata from IUIS classification table (February, 2018) downloaded 20180614. IUIS Genetic defect (original gene symbol in IUIS download): HMOX .PanelApp HGNC gene symbol check: HMOX1 . IUIS Disease: Isolated congenital asplenia (ICA) due to HMOX deficiency . IUIS Inheritance: AR .T cells: N/A, .B cells: N/A, .IUIS Other affected cells: Macrophages. IUIS Associated features: Hemolysis, nephritis, inflammation. IUIS Major category: Defects in Intrinsic and Innate Immunity. IUIS Subcategory: Other Inborn Errors of Immunity Related to Non-Hematopoietic TissuesCreated: 6 Jul 2018, 12:20 p.m.
Sophie Hambleton (Newcastle University)
Only one report of asplenia as part of this syndrome (phenotype dominated by haemolysis, endothelial inflammation)Created: 29 Jun 2018, 8:54 p.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
haemolysis; nephritis; asplenia; amyloidosis
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- NHS GMS
- IUIS Classification February 2018
- Phenotypes
-
- Heme oxygenase-1 deficiency, OMIM:614034
- Hemolysis, nephritis, inflammation
- Defects in Intrinsic and Innate Immunity
- amyloidosis
- OMIM
- 141250
- Clinvar variants
- Variants in HMOX1
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Removed Tag, Removed Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag Q4_23_promote_green was removed from gene: HMOX1. Tag Q4_23_NHS_review was removed from gene: HMOX1.
Added New Source, Added New Source, Status Update
Achchuthan Shanmugasundram (Genomics England Curator)Source NHS GMS was added to HMOX1. Source Expert Review Green was added to HMOX1. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Added Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag Q4_23_NHS_review tag was added to gene: HMOX1.
Entity classified by Genomics England curator
Achchuthan Shanmugasundram (Genomics England Curator)Gene: hmox1 has been classified as Amber List (Moderate Evidence).
Set Phenotypes
Achchuthan Shanmugasundram (Genomics England Curator)Phenotypes for gene: HMOX1 were changed from Hemolysis, nephritis, inflammation; Defects in Intrinsic and Innate Immunity; amyloidosis to Heme oxygenase-1 deficiency, OMIM:614034; Hemolysis, nephritis, inflammation; Defects in Intrinsic and Innate Immunity; amyloidosis
Set publications
Achchuthan Shanmugasundram (Genomics England Curator)Publications for gene: HMOX1 were set to 9884342; 21088618; 22023467; 26526137; 3306677
Set publications
Achchuthan Shanmugasundram (Genomics England Curator)Publications for gene: HMOX1 were set to 9884342; 21088618
Added Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag Q4_23_promote_green tag was added to gene: HMOX1.
Panel promoted to version 1.0
Louise Daugherty (Genomics England Curator)2018-07-12 Louise Daugherty (Genomics England Curator) promoted panel to v1.0. Reviews were assessed, and panel was revised according to expert reviews and further in-house curation based on PanelApp guidelines. Previous panels (A- or hypo-gammaglobulinaemia, Congenital neutropaenia, Agranulocytosis, Combined B and T cell defect, Inherited complement deficiency and SCID panels) that were merged with this panel, were checked again for any changes/new reviews prior to versioning of this panel, these merged panels are now retired/made internal.
Entity classified by Genomics England curator
Louise Daugherty (Genomics England Curator)Gene: hmox1 has been classified as Red List (Low Evidence).
Set mode of inheritance
Louise Daugherty (Genomics England Curator)Mode of inheritance for gene: HMOX1 was changed from to BIALLELIC, autosomal or pseudoautosomal
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for gene: HMOX1 were set to Hemolysis, nephritis, inflammation; Defects in Intrinsic and Innate Immunity; amyloidosis
Set publications
Louise Daugherty (Genomics England Curator)Publications for gene: HMOX1 were set to 9884342; 21088618
Set penetrance
Louise Daugherty (Genomics England Curator)Phenotypes for gene HMOX1 were set to Hemolysis, nephritis, inflammation, Defects in Intrinsic and Innate Immunity
Added New Source
Louise Daugherty (Genomics England Curator)HMOX1 was added to Primary immunodeficiency disorders panel. Sources: IUIS Classification February 2018
Created
Louise Daugherty (Genomics England Curator)HMOX1 was created by Louise Daugherty