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Primary immunodeficiency or monogenic inflammatory bowel disease

Gene: IL23R

Green List (high evidence)

IL23R (interleukin 23 receptor)
EnsemblGeneIds (GRCh38): ENSG00000162594
EnsemblGeneIds (GRCh37): ENSG00000162594
OMIM: 607562, Gene2Phenotype
IL23R is in 3 panels

5 reviews

Sarah Leigh (Genomics England Curator)

Green List (high evidence)

The rating of this gene has been updated to green and the mode of inheritance updated to BIALLELIC, autosomal or pseudoautosomal following NHS Genomic Medicine Service approval.
Created: 3 May 2024, 8:36 p.m. | Last Modified: 3 May 2024, 8:36 p.m.
Panel Version: 5.3

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Achchuthan Shanmugasundram (Genomics England Curator)

Green List (high evidence)

Comment on list classification: As reviewed by Dmitrijs Rots, there is sufficient evidence available for the promotion of this gene to green rating in the next GMS review.
Created: 4 Jan 2024, 10:26 a.m. | Last Modified: 4 Jan 2024, 10:26 a.m.
Panel Version: 4.137

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
inherited susceptibility to mycobacterial diseases, MONDO:0019146; chronic mucocutaneous candidiasis, MONDO:0015279

Publications

Dmitrijs Rots (Children's Clinical University Hospital)

Green List (high evidence)

Novel study 36763636 reported 6 cases from 4 families with biallelic variants in IL23R and functional studies.
Created: 13 Mar 2023, 6:54 a.m. | Last Modified: 13 Mar 2023, 6:54 a.m.
Panel Version: 3.6

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Mendelian susceptibility to mycobacterial disease (MSMD); chronic mucocutaneous candidiasis (CMC)

Publications

Ivone Leong (Genomics England Curator)

Comment on list classification: Gene given Red gene status based on expert review. This gene is also found in the IUIS 2019 paper (PMID: 31953710)
Created: 22 Apr 2020, 12:27 p.m. | Last Modified: 22 Apr 2020, 12:27 p.m.
Panel Version: 2.115

Zornitza Stark (Australian Genomics)

Red List (low evidence)

Single family reported.
Sources: Expert list
Created: 16 Apr 2020, 11:32 a.m.

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Susceptibility to mycobacteria and Salmonella

Publications

Details

Mode of Inheritance
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • inherited susceptibility to mycobacterial diseases, MONDO:0019146
  • chronic mucocutaneous candidiasis, MONDO:0015279
OMIM
607562
Clinvar variants
Variants in IL23R
Penetrance
None
Publications
Panels with this gene

History Filter Activity

3 May 2024, Gel status: 3

Removed Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag Q4_23_promote_green was removed from gene: IL23R.

3 May 2024, Gel status: 3

Added New Source, Added New Source, Status Update

Achchuthan Shanmugasundram (Genomics England Curator)

Source NHS GMS was added to IL23R. Source Expert Review Green was added to IL23R. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)

4 Jan 2024, Gel status: 2

Entity classified by Genomics England curator

Achchuthan Shanmugasundram (Genomics England Curator)

Gene: il23r has been classified as Amber List (Moderate Evidence).

4 Jan 2024, Gel status: 1

Entity classified by Genomics England curator

Achchuthan Shanmugasundram (Genomics England Curator)

Gene: il23r has been classified as Red List (Low Evidence).

4 Jan 2024, Gel status: 1

Set Phenotypes

Achchuthan Shanmugasundram (Genomics England Curator)

Phenotypes for gene: IL23R were changed from Susceptibility to mycobacteria and Salmonella to inherited susceptibility to mycobacterial diseases, MONDO:0019146; chronic mucocutaneous candidiasis, MONDO:0015279

4 Jan 2024, Gel status: 1

Set publications

Achchuthan Shanmugasundram (Genomics England Curator)

Publications for gene: IL23R were set to 30578351; 31953710

4 Jan 2024, Gel status: 1

Added Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag Q4_23_promote_green tag was added to gene: IL23R.

22 Apr 2020, Gel status: 1

Entity classified by Genomics England curator

Ivone Leong (Genomics England Curator)

Gene: il23r has been classified as Red List (Low Evidence).

22 Apr 2020, Gel status: 0

Set publications

Ivone Leong (Genomics England Curator)

Publications for gene: IL23R were set to 30578351

16 Apr 2020, Gel status: 0

Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes

Zornitza Stark (Australian Genomics)

gene: IL23R was added gene: IL23R was added to Primary immunodeficiency. Sources: Expert list Mode of inheritance for gene: IL23R was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: IL23R were set to 30578351 Phenotypes for gene: IL23R were set to Susceptibility to mycobacteria and Salmonella Review for gene: IL23R was set to RED