Primary immunodeficiency or monogenic inflammatory bowel disease
Gene: MCTS1EnsemblGeneIds (GRCh38): ENSG00000232119
EnsemblGeneIds (GRCh37): ENSG00000232119
OMIM: 300587, Gene2Phenotype
MCTS1 is in 1 panel
3 reviews
Sarah Leigh (Genomics England Curator)
The rating of this gene has been updated to green and the mode of inheritance set to X-LINKED: hemizygous mutation in males, biallelic mutations in females following NHS Genomic Medicine Service approval.Created: 3 May 2024, 8:36 p.m. | Last Modified: 3 May 2024, 8:36 p.m.
Panel Version: 5.3
Mode of inheritance
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Achchuthan Shanmugasundram (Genomics England Curator)
Comment on list classification: As reviewed by Boaz Palterer, there is sufficient evidence available (five unrelated cases) for the association of hemizygous MCTS1 variants with MSMD. Hence, this gene can be promoted to green rating in the next GMS review.Created: 5 Jan 2024, 6:45 p.m. | Last Modified: 5 Jan 2024, 6:45 p.m.
Panel Version: 4.155
Mode of inheritance
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Phenotypes
Inherited susceptibility to mycobacterial diseases, MONDO:0019146
Publications
Boaz Palterer (University of Florence)
Human MCTS1-dependent translation of JAK2 is essential for IFN-γ immunity to mycobacteria
https://doi.org/10.1016/j.cell.2023.09.024
Bohlen et al. identified 6 male subjects from 5 kindreds with LOF MCTS-1 variants with MSMD.
Extensive ex-vivo functional validation and mouse model.
Sources: LiteratureCreated: 24 Oct 2023, 7:46 p.m.
Mode of inheritance
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Phenotypes
MSMD; non tubercular mycobacteria infection; BCGtis; BCG infection
Details
- Mode of Inheritance
- X-LINKED: hemizygous mutation in males, biallelic mutations in females
- Sources
-
- Expert Review Green
- NHS GMS
- Phenotypes
-
- Inherited susceptibility to mycobacterial diseases, MONDO:0019146
- OMIM
- 300587
- Clinvar variants
- Variants in MCTS1
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
Removed Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag Q4_23_promote_green was removed from gene: MCTS1.
Added New Source, Added New Source, Status Update
Achchuthan Shanmugasundram (Genomics England Curator)Source NHS GMS was added to MCTS1. Source Expert Review Green was added to MCTS1. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Entity classified by Genomics England curator
Achchuthan Shanmugasundram (Genomics England Curator)Gene: mcts1 has been classified as Amber List (Moderate Evidence).
Set Phenotypes
Achchuthan Shanmugasundram (Genomics England Curator)Phenotypes for gene: MCTS1 were changed from MSMD; non tubercular mycobacteria infection; BCGtis; BCG infection to Inherited susceptibility to mycobacterial diseases, MONDO:0019146
Set publications
Achchuthan Shanmugasundram (Genomics England Curator)Publications for gene: MCTS1 were set to
Added Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag Q4_23_promote_green tag was added to gene: MCTS1.
Created, Added New Source, Set mode of inheritance, Set Phenotypes, Set penetrance
Boaz Palterer (University of Florence)gene: MCTS1 was added gene: MCTS1 was added to Primary immunodeficiency or monogenic inflammatory bowel disease. Sources: Literature Mode of inheritance for gene: MCTS1 was set to X-LINKED: hemizygous mutation in males, biallelic mutations in females Phenotypes for gene: MCTS1 were set to MSMD; non tubercular mycobacteria infection; BCGtis; BCG infection Penetrance for gene: MCTS1 were set to Complete Review for gene: MCTS1 was set to GREEN