Primary immunodeficiency or monogenic inflammatory bowel disease
Gene: KRASEnsemblGeneIds (GRCh38): ENSG00000133703
EnsemblGeneIds (GRCh37): ENSG00000133703
OMIM: 190070, Gene2Phenotype
KRAS is in 28 panels
2 reviews
Sophie Hambleton (Newcastle University)
Somatic GOF variants expressed within the haematopoietic system are associated with a syndrome of autoimmunity and lymphoproliferation. Germline variants not described to date.Created: 20 Jun 2018, 8:03 p.m.
Mode of inheritance
Unknown
Phenotypes
RALD
Publications
Mode of pathogenicity
Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments
Louise Daugherty (Genomics England Curator)
Comment on publications: Added publications suggested from external expert review to support phenotypeCreated: 27 Jun 2018, 10:13 a.m.
Keep Amber. The pattern of inheritance for RALD is not known. RAS mutations are considered somatic and limited to the circulating peripheral blood mononuclear cells.Created: 27 Jun 2018, 10:11 a.m.
This gene was absent from the original PanelApp PID panel dataset (review April 2018). However it was listed in external expert immunodeficiency diagnostic gene list(s) GOSH or GRID. In this combined PID panel, this gene has been rated as AMBER and needs further curational review to assess pertinence prior to v1.Created: 20 Apr 2018, 12:25 p.m.
Original metadata downloaded from ESID Registry. ESID_Gene_original: K-Ras, PanelApp HGNC gene symbol check: KRAS, ESID classification: Main_category/ Sub_category/ PID_Diagnosis Diseases of immune dysregulation / Autoimmune lymphoproliferative syndrome (ALPS) / Ras associated lymphoproliferative disease (RALD)Created: 17 Apr 2018, 12:29 p.m.
Original metadata supplied by GRID. GRID Gene Symbol HGNC PanelApp check: KRAS, GRID_Gene_Symbol: KRAS, GRID_Transcript_ENS_Community submitted: ENST00000256078, GRID_Transcript_RefSeq: NM_033360.3, GRID_Transcript_ENS_used_on_Production: ENST00000256078Created: 17 Apr 2018, 12:12 p.m.
Details
- Mode of Inheritance
- Unknown
- Sources
-
- Expert Review Amber
- ESID Registry 20171117
- GRID V2.0
- Phenotypes
-
- RAS associated lymphoproliferative disease, 614470
- RALD
- OMIM
- 190070
- Clinvar variants
- Variants in KRAS
- Penetrance
- None
- Publications
- Mode of Pathogenicity
- Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments
- Panels with this gene
-
- Rare syndromic craniosynostosis or isolated multisuture synostosis
- Neurological segmental overgrowth
- Primary lymphoedema
- Childhood solid tumours cancer susceptibility
- Intellectual disability
- Cytopenias and congenital anaemias
- Hereditary neuropathy
- Primary immunodeficiency or monogenic inflammatory bowel disease
- Multiple monogenic benign skin tumours
- DDG2P
- Sarcoma cancer susceptibility
- Fetal anomalies
- Pigmentary skin disorders
- Monogenic short stature
- COVID-19 research
- Osteogenesis imperfecta
- Fetal hydrops
- Familial rhabdomyosarcoma
- Segmental overgrowth disorders - Deep sequencing
- Sarcoma susceptibility
- Hereditary neuropathy or pain disorder
- Childhood solid tumours
- Adult solid tumours cancer susceptibility
- RASopathies
- IUGR and IGF abnormalities
- Mosaic skin disorders - deep sequencing
- Paediatric or syndromic cardiomyopathy
- Early onset or syndromic epilepsy
History Filter Activity
Panel promoted to version 1.0
Louise Daugherty (Genomics England Curator)2018-07-12 Louise Daugherty (Genomics England Curator) promoted panel to v1.0. Reviews were assessed, and panel was revised according to expert reviews and further in-house curation based on PanelApp guidelines. Previous panels (A- or hypo-gammaglobulinaemia, Congenital neutropaenia, Agranulocytosis, Combined B and T cell defect, Inherited complement deficiency and SCID panels) that were merged with this panel, were checked again for any changes/new reviews prior to versioning of this panel, these merged panels are now retired/made internal.
Entity classified by Genomics England curator
Louise Daugherty (Genomics England Curator)Gene: kras has been classified as Amber List (Moderate Evidence).
Set mode of pathogenicity
Louise Daugherty (Genomics England Curator)Mode of pathogenicity for gene: KRAS was changed to Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments
Set mode of inheritance
Louise Daugherty (Genomics England Curator)Mode of inheritance for gene: KRAS was changed from Other - please specify in evaluation comments to Unknown
Set publications
Louise Daugherty (Genomics England Curator)Publications for gene: KRAS were set to 21079152; 21063026
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for gene: KRAS were set to RAS associated lymphoproliferative disease, 614470; RALD
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for KRAS were set to Ras associated lymphoproliferative disease; RALD
Added New Source
Louise Daugherty (Genomics England Curator)Expert Review Amber was added to KRAS. Panel: Primary immunodeficiency disorders
Added New Source, Set penetrance
Louise Daugherty (Genomics England Curator)ESID Registry 20171117 was added to KRAS. Panel: Primary immunodeficiency disorders Phenotypes for gene KRAS were set to Ras associated lymphoproliferative disease, Ras associated lymphoproliferative disease (RALD)
Set penetrance
Louise Daugherty (Genomics England Curator)Phenotypes for gene KRAS were set to Ras associated lymphoproliferative disease
Added New Source
Louise Daugherty (Genomics England Curator)KRAS was added to Primary immunodeficiency disorders panel. Sources: GRID V2.0
Created
Louise Daugherty (Genomics England Curator)KRAS was created by Louise Daugherty